Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-dehydroascorbate transporter large permease subunit | APR48_02040 | Not Available | Negative | 442149 - 443426 | 44843.5 |
| hypothetical protein | APR48_02045 | Not Available | Negative | 443449 - 443967 | 18919.4 |
| hypothetical protein | APR48_02050 | Not Available | Positive | 444070 - 444783 | 26186.5 |
| sugar abc transporter substrate-binding protein | APR48_02055 | Not Available | Negative | 444780 - 445829 | 37238.2 |
| iron abc transporter permease | APR48_02060 | Not Available | Negative | 445852 - 448089 | 78605.2 |
| iron abc transporter substrate-binding protein | APR48_02065 | Not Available | Negative | 448100 - 449098 | 36160.9 |
| hypothetical protein | APR48_02070 | Not Available | Negative | 449257 - 450570 | 46971.4 |
| two-component system response regulator | APR48_02075 | Not Available | Negative | 450567 - 451256 | 24887.1 |
| gcn5 family acetyltransferase | APR48_02080 | Not Available | Positive | 451448 - 451888 | 16198.5 |
| amino acid abc transporter substrate-binding protein | APR48_02085 | Not Available | Negative | 452097 - 453176 | 38264.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
