Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_28565 | Not Available | Positive | 6139951 - 6140316 | 13278.0 |
| lysr family transcriptional regulator | APR48_28570 | Not Available | Negative | 6140331 - 6141236 | 32835.9 |
| cupin | APR48_28575 | Not Available | Positive | 6141346 - 6141840 | 17330.5 |
| carboxymuconolactone decarboxylase | APR48_28580 | Not Available | Positive | 6141908 - 6142576 | 23650.6 |
| hypothetical protein | APR48_28585 | Not Available | Positive | 6142768 - 6143448 | 23326.1 |
| hypothetical protein | APR48_28590 | Not Available | Positive | 6143445 - 6143945 | 18869.9 |
| cobalamin biosynthesis protein cobs | APR48_28600 | Not Available | Positive | 6144314 - 6145288 | 36132.5 |
| cobalt chelatase | APR48_28605 | Not Available | Positive | 6145301 - 6147028 | 64440.8 |
| iclr family transcriptional regulator | APR48_28610 | Not Available | Positive | 6147302 - 6148093 | 27995.7 |
| laci family transcriptional regulator | APR48_28615 | Not Available | Positive | 6148090 - 6149082 | 34604.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
