Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_28515 | Not Available | Positive | 6130588 - 6131106 | 17053.3 |
| hypothetical protein | APR48_28520 | Not Available | Positive | 6131139 - 6131807 | 22931.4 |
| hypothetical protein | APR48_28525 | Not Available | Positive | 6131895 - 6132113 | 7606.19 |
| cmp deaminase | APR48_28530 | Not Available | Positive | 6132103 - 6133197 | 38725.2 |
| ld-carboxypeptidase | APR48_28535 | Not Available | Positive | 6133194 - 6134192 | 35917.0 |
| hypothetical protein | APR48_28540 | Not Available | Negative | 6134283 - 6134618 | 12326.2 |
| adenylate cyclase | APR48_28545 | Not Available | Positive | 6134966 - 6135910 | 33991.6 |
| hypothetical protein | APR48_28550 | Not Available | Positive | 6136045 - 6136392 | 12346.5 |
| hypothetical protein | APR48_28555 | Not Available | Positive | 6136648 - 6138438 | 63157.7 |
| tat pathway signal protein | APR48_28560 | Not Available | Positive | 6138482 - 6139954 | 51624.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
