Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| naphthalene 1,2-dioxygenase | APR48_28460 | Not Available | Positive | 6121540 - 6122532 | 35593.2 |
| salicylate hydroxylase | APR48_28465 | Not Available | Positive | 6122563 - 6123822 | 48467.6 |
| salicylate hydroxylase | APR48_28470 | Not Available | Positive | 6123819 - 6124301 | 18250.6 |
| chorismate mutase | APR48_28475 | Not Available | Positive | 6124305 - 6124673 | 13817.4 |
| abc transporter substrate-binding protein | APR48_28480 | Not Available | Positive | 6124670 - 6125629 | 34085.4 |
| naphthalene 1,2-dioxygenase | APR48_28485 | Not Available | Positive | 6125659 - 6125979 | 11528.6 |
| hypothetical protein | APR48_28495 | Not Available | Positive | 6126760 - 6127242 | 16915.1 |
| hypothetical protein | APR48_28500 | Not Available | Negative | 6127244 - 6128302 | 38098.8 |
| histidine kinase | APR48_28505 | Not Available | Positive | 6128369 - 6129853 | 53986.4 |
| luxr family transcriptional regulator | APR48_28510 | Not Available | Positive | 6129850 - 6130479 | 22977.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
