Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | APR48_28360 | Not Available | Negative | 6102536 - 6103300 | 29150.8 |
| transposase | APR48_28365 | Not Available | Negative | 6103444 - 6103767 | 12314.8 |
| hypothetical protein | APR48_28370 | Not Available | Positive | 6103842 - 6104024 | 6412.55 |
| hypothetical protein | APR48_28375 | Not Available | Positive | 6104028 - 6104912 | 31754.0 |
| ornithine cyclodeaminase | APR48_28380 | Not Available | Negative | 6105029 - 6105973 | 33275.9 |
| ferredoxin:oxidoreductase fad/nad(p)-binding protein | APR48_28385 | Not Available | Negative | 6106005 - 6109475 | 126025.0 |
| short chain fatty acid transporter | APR48_28390 | Not Available | Negative | 6109472 - 6110914 | 51081.3 |
| hypothetical protein | APR48_28395 | Not Available | Positive | 6111077 - 6112015 | 34487.7 |
| quercetin 2,3-dioxygenase | APR48_28400 | Not Available | Negative | 6112058 - 6112924 | 31062.0 |
| lysr family transcriptional regulator | APR48_28405 | Not Available | Positive | 6113055 - 6113957 | 32679.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
