Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion protein rhs | APR48_28210 | Not Available | Negative | 6063261 - 6065536 | 80783.3 |
| terpene utilization protein atua | APR48_28215 | Not Available | Negative | 6065544 - 6067325 | 62215.3 |
| hypothetical protein | APR48_28220 | Not Available | Negative | 6067375 - 6067866 | 17381.8 |
| mbl fold metallo-hydrolase | APR48_28225 | Not Available | Negative | 6067901 - 6069550 | 59528.1 |
| hypothetical protein | APR48_28230 | Not Available | Negative | 6069564 - 6070970 | 52813.8 |
| atpase | APR48_28235 | Not Available | Negative | 6070954 - 6071913 | 35885.3 |
| hypothetical protein | APR48_28240 | Not Available | Negative | 6071906 - 6073096 | 41582.0 |
| acyl-coa dehydrogenase | APR48_28245 | Not Available | Negative | 6073093 - 6074241 | 41263.6 |
| 3-methylcrotonyl-coa carboxylase | APR48_28250 | Not Available | Negative | 6074279 - 6076249 | 69721.2 |
| acetyl-coa carboxylase carboxyltransferase subunit | APR48_28255 | Not Available | Negative | 6076261 - 6077880 | 58347.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
