Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_28105 | Not Available | Negative | 6040459 - 6040830 | 13056.1 |
| metal abc transporter substrate-binding protein | APR48_28110 | Not Available | Negative | 6040860 - 6041684 | 29880.1 |
| methionine abc transporter atp-binding protein | APR48_28115 | Not Available | Negative | 6041733 - 6042395 | 23458.6 |
| abc transporter atp-binding protein | APR48_28120 | Not Available | Negative | 6042388 - 6043281 | 32410.9 |
| metal abc transporter substrate-binding protein | APR48_28125 | Not Available | Positive | 6043566 - 6044387 | 29033.1 |
| peptide chain release factor 2 | APR48_28130 | Not Available | Positive | 6044831 - 6045673 | 31294.6 |
| haloacid dehalogenase | APR48_28135 | Not Available | Positive | 6045723 - 6046409 | 24769.6 |
| aminopeptidase | APR48_28140 | Not Available | Positive | 6046393 - 6049110 | 100350.0 |
| fructose 1,6-bisphosphatase | APR48_28145 | Not Available | Positive | 6049154 - 6050167 | 37466.1 |
| Trna-thr | Not Available | Not Available | Positive | 6050193 - 6050268 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
