Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | APR48_01990 | Not Available | Negative | 431324 - 432223 | 32809.9 |
| amino acid abc transporter substrate-binding protein | APR48_01995 | Not Available | Positive | 432704 - 433720 | 36348.9 |
| amino acid abc transporter permease | APR48_02000 | Not Available | Positive | 433783 - 434973 | 42145.0 |
| amino acid abc transporter permease | APR48_02005 | Not Available | Positive | 434975 - 436081 | 40226.5 |
| hypothetical protein | APR48_02010 | Not Available | Positive | 436115 - 436855 | 28164.5 |
| methionine gamma-lyase | APR48_02015 | Not Available | Positive | 436891 - 438093 | 42986.2 |
| methionine gamma-lyase | APR48_02020 | Not Available | Positive | 438224 - 439423 | 43004.0 |
| 2-dehydro-3-deoxygluconokinase | APR48_02025 | Not Available | Negative | 439430 - 440374 | 32625.8 |
| dimethylmenaquinone methyltransferase | APR48_02030 | Not Available | Negative | 440361 - 441011 | 22906.6 |
| abc transporter substrate-binding protein | APR48_02035 | Not Available | Negative | 441126 - 442109 | 35690.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
