Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | APR48_27995 | Not Available | Positive | 6022146 - 6022901 | 27765.7 |
| abc transporter atp-binding protein | APR48_28000 | Not Available | Positive | 6022898 - 6023617 | 26313.2 |
| 3-keto-5-aminohexanoate cleavage protein | APR48_28005 | Not Available | Positive | 6023657 - 6024598 | 34366.5 |
| 3-hydroxyacyl-coa dehydrogenase | APR48_28010 | Not Available | Positive | 6024639 - 6025541 | 31814.0 |
| bifunctional folylpolyglutamate synthase/dihydrofolate synthase | APR48_28020 | Not Available | Negative | 6026324 - 6027622 | 46881.5 |
| arsc family transcriptional regulator | APR48_28025 | Not Available | Positive | 6027646 - 6028029 | 14224.9 |
| hypothetical protein | APR48_28030 | Not Available | Positive | 6028164 - 6028796 | 22399.9 |
| hypothetical protein | APR48_28035 | Not Available | Positive | 6028926 - 6029249 | 11202.1 |
| argininosuccinate synthase | APR48_28040 | Not Available | Positive | 6029270 - 6030610 | 49406.0 |
| udp-n-acetylenolpyruvoylglucosamine reductase | APR48_28050 | Not Available | Negative | 6031426 - 6032484 | 38470.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
