Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tctc | APR48_27945 | Not Available | Positive | 6010113 - 6011117 | 34366.1 |
| marr family transcriptional regulator | APR48_27950 | Not Available | Negative | 6011251 - 6011763 | 18586.6 |
| hypothetical protein | APR48_27955 | Not Available | Positive | 6011955 - 6012962 | 35883.5 |
| abc transporter substrate-binding protein | APR48_27960 | Not Available | Positive | 6013000 - 6013986 | 34812.4 |
| twin-arginine translocation pathway signal protein | APR48_27965 | Not Available | Positive | 6014018 - 6015346 | 49278.3 |
| cdar family transcriptional regulator | APR48_27970 | Not Available | Negative | 6015434 - 6017458 | 72819.2 |
| 3-ketoacyl-acp reductase | APR48_27975 | Not Available | Positive | 6017676 - 6018467 | 27888.9 |
| amino acid-binding protein | APR48_27980 | Not Available | Positive | 6018516 - 6019781 | 44490.0 |
| abc transporter permease | APR48_27985 | Not Available | Positive | 6019898 - 6020839 | 33041.0 |
| branched-chain amino acid abc transporter permease | APR48_27990 | Not Available | Positive | 6020857 - 6022149 | 45024.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
