Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_27895 | Not Available | Negative | 5998797 - 5999546 | 27743.4 |
| serine acetyltransferase | APR48_27900 | Not Available | Negative | 5999548 - 6000318 | 27418.0 |
| rrna methyltransferase | APR48_27905 | Not Available | Negative | 6000401 - 6001132 | 26448.0 |
| hypothetical protein | APR48_27910 | Not Available | Positive | 6002376 - 6004652 | 81780.1 |
| mechanosensitive ion channel protein mscs | APR48_27915 | Not Available | Positive | 6004649 - 6005743 | 39873.3 |
| hypothetical protein | APR48_27920 | Not Available | Positive | 6005776 - 6006168 | 14240.0 |
| methyltransferase | APR48_27925 | Not Available | Positive | 6006245 - 6007132 | 32070.0 |
| hypothetical protein | APR48_27930 | Not Available | Negative | 6007129 - 6008331 | 43513.1 |
| hypothetical protein | APR48_27935 | Not Available | Negative | 6008339 - 6009001 | 24594.1 |
| lysr family transcriptional regulator | APR48_27940 | Not Available | Negative | 6009041 - 6009985 | 33886.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
