Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system response regulator | APR48_27845 | Not Available | Positive | 5987554 - 5988231 | 25587.2 |
| histidine kinase | APR48_27850 | Not Available | Positive | 5988264 - 5989604 | 48204.0 |
| lipase | APR48_27855 | Not Available | Positive | 5989823 - 5990779 | 33101.8 |
| hypothetical protein | APR48_27860 | Not Available | Positive | 5990929 - 5991717 | 29133.1 |
| na+/h+-exchanging protein | APR48_27865 | Not Available | Negative | 5991714 - 5992964 | 42807.0 |
| histidine kinase | APR48_27870 | Not Available | Negative | 5992974 - 5994821 | 66957.4 |
| hxlr family transcriptional regulator | APR48_27875 | Not Available | Negative | 5994868 - 5995185 | 11838.3 |
| carboxymuconolactone decarboxylase | APR48_27880 | Not Available | Positive | 5995281 - 5995859 | 21469.9 |
| 4-deoxy-4-formamido-l-arabinose-phospho-udp deformylase | APR48_27885 | Not Available | Negative | 5995861 - 5998197 | 80761.8 |
| cd(ii)/pb(ii)-responsive transcriptional regulator | APR48_27890 | Not Available | Positive | 5998316 - 5998780 | 17060.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
