Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_27785 | Not Available | Negative | 5976203 - 5976709 | 18810.0 |
| hcp1 family type vi secretion system effector | APR48_27790 | Not Available | Negative | 5976760 - 5977245 | 17707.8 |
| evpb family type vi secretion protein | APR48_27795 | Not Available | Negative | 5977326 - 5978828 | 56087.1 |
| hypothetical protein | APR48_27800 | Not Available | Negative | 5978857 - 5979393 | 19423.4 |
| isocitrate dehydrogenase | APR48_27810 | Not Available | Negative | 5982534 - 5983793 | 45871.3 |
| cell envelope biogenesis protein tola | APR48_27815 | Not Available | Positive | 5984015 - 5984338 | 10963.8 |
| hypothetical protein | APR48_27820 | Not Available | Positive | 5984506 - 5984697 | 6366.91 |
| hypothetical protein | APR48_27825 | Not Available | Positive | 5984802 - 5985272 | 17338.2 |
| cobalt-zinc-cadmium resistance protein | APR48_27835 | Not Available | Negative | 5985580 - 5986909 | 47160.9 |
| hypothetical protein | APR48_27840 | Not Available | Negative | 5987014 - 5987391 | 13503.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
