Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cardiolipin synthase | APR48_27730 | Not Available | Negative | 5960330 - 5961775 | 53202.4 |
| atp-dependent clp protease atp-binding subunit clpa | APR48_27735 | Not Available | Negative | 5961887 - 5964208 | 84765.0 |
| atp-dependent clp protease adaptor clps | APR48_27740 | Not Available | Negative | 5964277 - 5964636 | 13257.0 |
| hypothetical protein | APR48_27745 | Not Available | Negative | 5965121 - 5966131 | 36182.9 |
| type vi secretion protein | APR48_27750 | Not Available | Negative | 5966128 - 5967216 | 40090.0 |
| hypothetical protein | APR48_27755 | Not Available | Negative | 5967213 - 5967878 | 23542.4 |
| hypothetical protein | APR48_27760 | Not Available | Negative | 5967887 - 5968678 | 28898.2 |
| type vi secretion protein vask | APR48_27765 | Not Available | Negative | 5968683 - 5972705 | 145748.0 |
| hypothetical protein | APR48_27775 | Not Available | Negative | 5974109 - 5974699 | 21179.1 |
| type vi secretion protein | APR48_27780 | Not Available | Negative | 5974818 - 5976173 | 49579.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
