Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnd transporter mfp subunit | APR48_01940 | Not Available | Positive | 418889 - 420082 | 41907.8 |
| transporter | APR48_01945 | Not Available | Positive | 420079 - 423285 | 114578.0 |
| rnd transporter | APR48_01950 | Not Available | Positive | 423282 - 424793 | 53523.3 |
| nadh:flavin oxidoreductase | APR48_01955 | Not Available | Positive | 424867 - 425889 | 37023.2 |
| transcriptional regulator | APR48_01960 | Not Available | Negative | 425905 - 426816 | 33638.4 |
| lysr family transcriptional regulator | APR48_01965 | Not Available | Negative | 426840 - 427826 | 36142.4 |
| hypothetical protein | APR48_01970 | Not Available | Positive | 427990 - 428361 | 12977.4 |
| lysr family transcriptional regulator | APR48_01975 | Not Available | Negative | 428395 - 429294 | 32735.9 |
| hypothetical protein | APR48_01980 | Not Available | Positive | 429425 - 430360 | 34279.5 |
| hypothetical protein | APR48_01985 | Not Available | Positive | 430363 - 431319 | 34126.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
