Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | APR48_27525 | Not Available | Positive | 5909268 - 5910752 | 54682.7 |
| hypothetical protein | APR48_27530 | Not Available | Positive | 5910861 - 5913152 | 82956.9 |
| cysteine methyltransferase | APR48_27535 | Not Available | Negative | 5913097 - 5913639 | 19366.3 |
| mfs transporter | APR48_27540 | Not Available | Negative | 5913636 - 5914847 | 41087.8 |
| hypothetical protein | APR48_27545 | Not Available | Negative | 5914920 - 5917991 | 107847.0 |
| lactate dehydrogenase | APR48_27550 | Not Available | Negative | 5918307 - 5921378 | 110066.0 |
| gntr family transcriptional regulator | APR48_27555 | Not Available | Negative | 5921408 - 5922115 | 26289.0 |
| serine--glyoxylate aminotransferase | APR48_27560 | Not Available | Positive | 5922247 - 5923491 | 44416.7 |
| laci family transcriptional regulator | APR48_27565 | Not Available | Positive | 5923631 - 5924608 | 34333.4 |
| 2-keto-4-pentenoate hydratase | APR48_27570 | Not Available | Positive | 5924843 - 5925613 | 27051.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
