Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_27205 | Not Available | Negative | 5841314 - 5843635 | 81489.5 |
| merr family transcriptional regulator | APR48_27210 | Not Available | Negative | 5843658 - 5844119 | 16287.7 |
| cystathionine beta-lyase | APR48_27215 | Not Available | Positive | 5844200 - 5845396 | 43053.4 |
| hypothetical protein | APR48_27220 | Not Available | Positive | 5845482 - 5845685 | 7506.81 |
| arylesterase | APR48_27225 | Not Available | Negative | 5845792 - 5846445 | 22971.8 |
| abc transporter | APR48_27230 | Not Available | Positive | 5846461 - 5847171 | 25316.5 |
| hypothetical protein | APR48_27235 | Not Available | Positive | 5847212 - 5847685 | 16789.3 |
| hypothetical protein | APR48_27240 | Not Available | Positive | 5847691 - 5848674 | 36426.6 |
| 23s rrna methyltransferase | APR48_27245 | Not Available | Positive | 5848721 - 5849467 | 26092.4 |
| lysr family transcriptional regulator | APR48_27250 | Not Available | Negative | 5849484 - 5849657 | 5949.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
