Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna-binding protein | APR48_27155 | Not Available | Positive | 5832550 - 5832795 | 9059.87 |
| gtpase hflx | APR48_27160 | Not Available | Positive | 5832854 - 5834023 | 43131.6 |
| hypothetical protein | APR48_27165 | Not Available | Positive | 5834098 - 5835462 | 49205.8 |
| hypothetical protein | APR48_27170 | Not Available | Positive | 5835483 - 5836376 | 33631.3 |
| hypothetical protein | APR48_27175 | Not Available | Positive | 5836405 - 5836593 | 6870.68 |
| atp phosphoribosyltransferase regulatory subunit | APR48_27180 | Not Available | Positive | 5836712 - 5837872 | 41607.0 |
| adenylosuccinate synthetase | APR48_27185 | Not Available | Positive | 5837894 - 5839225 | 47900.6 |
| nicotinate phosphoribosyltransferase | APR48_27190 | Not Available | Positive | 5839316 - 5839840 | 19693.6 |
| glyxoylase | APR48_27195 | Not Available | Negative | 5839908 - 5840366 | 16935.0 |
| arac family transcriptional regulator | APR48_27200 | Not Available | Negative | 5840428 - 5841312 | 31208.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
