Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | APR48_27105 | Not Available | Positive | 5822270 - 5822817 | 21270.5 |
| nucleoside diphosphate kinase | APR48_27110 | Not Available | Positive | 5823011 - 5823436 | 15235.3 |
| 23s rrna (adenine(2503)-c2)-methyltransferase | APR48_27115 | Not Available | Positive | 5823458 - 5824633 | 43167.9 |
| pilus assembly protein pilw | APR48_27120 | Not Available | Positive | 5824638 - 5825489 | 31030.5 |
| hypothetical protein | APR48_27125 | Not Available | Positive | 5825482 - 5826432 | 31744.4 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | APR48_27130 | Not Available | Positive | 5826426 - 5827703 | 46031.4 |
| histidine--trna ligase | APR48_27135 | Not Available | Positive | 5827717 - 5829054 | 48303.2 |
| hypothetical protein | APR48_27140 | Not Available | Positive | 5829144 - 5829836 | 25286.8 |
| outer membrane protein assembly factor bamb | APR48_27145 | Not Available | Positive | 5829849 - 5830991 | 39216.8 |
| ribosome-associated gtpase enga | APR48_27150 | Not Available | Positive | 5831042 - 5832388 | 49639.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
