Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase f0f1 subunit c | APR48_26950 | Not Available | Positive | 5791486 - 5791725 | 8158.17 |
| abc transporter substrate-binding protein | APR48_26955 | Not Available | Positive | 5791961 - 5793154 | 42231.4 |
| abc transporter permease | APR48_26960 | Not Available | Positive | 5793321 - 5794241 | 31770.7 |
| branched-chain amino acid abc transporter permease | APR48_26965 | Not Available | Positive | 5794238 - 5795188 | 33502.9 |
| abc transporter atp-binding protein | APR48_26970 | Not Available | Positive | 5795185 - 5795940 | 26952.8 |
| abc transporter atp-binding protein | APR48_26975 | Not Available | Positive | 5795952 - 5796653 | 25248.9 |
| mfs transporter | APR48_26980 | Not Available | Negative | 5796660 - 5797868 | 41249.1 |
| arac family transcriptional regulator | APR48_26985 | Not Available | Positive | 5797944 - 5798894 | 34064.8 |
| sulfate transporter | APR48_26990 | Not Available | Negative | 5798901 - 5800358 | 50755.1 |
| 3-oxoacyl-acp reductase | APR48_26995 | Not Available | Negative | 5800678 - 5801388 | 25016.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
