Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fur family transcriptional regulator | APR48_26895 | Not Available | Negative | 5772355 - 5772768 | 15527.6 |
| hypothetical protein | APR48_26900 | Not Available | Negative | 5772898 - 5773122 | 7853.52 |
| phosphonomutase | APR48_26905 | Not Available | Negative | 5773289 - 5774110 | 28525.1 |
| hypothetical protein | APR48_26915 | Not Available | Negative | 5781224 - 5781412 | 6196.62 |
| trehalose utilization | APR48_26920 | Not Available | Negative | 5781456 - 5782460 | 35840.8 |
| hypothetical protein | APR48_26925 | Not Available | Positive | 5783438 - 5785183 | 61331.0 |
| single-stranded dna-binding protein | APR48_26930 | Not Available | Negative | 5785259 - 5785792 | 18811.9 |
| chloride channel protein | APR48_26935 | Not Available | Positive | 5785931 - 5787298 | 47452.4 |
| abc-atpase uvra | APR48_26940 | Not Available | Positive | 5787346 - 5790441 | 113344.0 |
| hypothetical protein | APR48_26945 | Not Available | Positive | 5790504 - 5791391 | 32155.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
