Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | APR48_26845 | Not Available | Positive | 5757728 - 5759752 | 73655.7 |
| hypothetical protein | APR48_26850 | Not Available | Negative | 5759730 - 5760599 | 32431.2 |
| urocanate hydratase | APR48_26855 | Not Available | Positive | 5760908 - 5762578 | 60828.6 |
| hypothetical protein | APR48_26860 | Not Available | Positive | 5762596 - 5763552 | 33917.2 |
| abc transporter permease | APR48_26865 | Not Available | Positive | 5763563 - 5764456 | 30132.8 |
| abc transporter atp-binding protein | APR48_26870 | Not Available | Positive | 5764453 - 5765247 | 28546.7 |
| hypothetical protein | APR48_26875 | Not Available | Positive | 5765255 - 5766442 | 43006.2 |
| hypothetical protein | APR48_26880 | Not Available | Positive | 5766484 - 5767410 | 32499.3 |
| histidine kinase | APR48_26885 | Not Available | Positive | 5767546 - 5770092 | 93694.5 |
| diguanylate phosphodiesterase | APR48_26890 | Not Available | Negative | 5770089 - 5772212 | 76091.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
