Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine 2-epimerase | APR48_26790 | Not Available | Negative | 5747569 - 5748702 | 41639.1 |
| alpha/beta hydrolase | APR48_26795 | Not Available | Negative | 5748949 - 5749986 | 37535.6 |
| antitoxin of toxin-antitoxin stability system | APR48_26800 | Not Available | Positive | 5750272 - 5750565 | 11231.3 |
| addiction module toxin rele | APR48_26805 | Not Available | Positive | 5750562 - 5750849 | 10801.0 |
| hypothetical protein | APR48_26810 | Not Available | Positive | 5750985 - 5751224 | 8844.18 |
| lysr family transcriptional regulator | APR48_26815 | Not Available | Negative | 5751267 - 5752061 | 28563.1 |
| lysr family transcriptional regulator | APR48_26825 | Not Available | Positive | 5753116 - 5754003 | 31897.3 |
| 3-isopropylmalate dehydratase | APR48_26830 | Not Available | Positive | 5754098 - 5756101 | 70780.3 |
| abc transporter substrate-binding protein | APR48_26835 | Not Available | Positive | 5756140 - 5757123 | 33257.6 |
| hypothetical protein | APR48_26840 | Not Available | Positive | 5757127 - 5757612 | 16569.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
