Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_26630 | Not Available | Positive | 5709596 - 5711005 | 49211.2 |
| hypothetical protein | APR48_26635 | Not Available | Positive | 5711005 - 5711973 | 34314.5 |
| dna-binding protein | APR48_26640 | Not Available | Negative | 5711983 - 5712381 | 14218.0 |
| acetyl-coa acetyltransferase | APR48_26645 | Not Available | Negative | 5712384 - 5713553 | 40156.1 |
| long-chain fatty acid--coa ligase | APR48_26650 | Not Available | Positive | 5713744 - 5715408 | 60634.4 |
| 3-oxoacyl-acp reductase | APR48_26655 | Not Available | Positive | 5715467 - 5716240 | 27035.7 |
| hypothetical protein | APR48_26660 | Not Available | Positive | 5716255 - 5717292 | 38876.0 |
| enoyl-coa hydratase | APR48_26665 | Not Available | Positive | 5717289 - 5718080 | 27933.0 |
| 3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-coa hydratase | APR48_26670 | Not Available | Positive | 5718128 - 5718994 | 31456.7 |
| hypothetical protein | APR48_26675 | Not Available | Positive | 5718991 - 5719998 | 34700.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
