Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione peroxidase | APR48_26525 | Not Available | Negative | 5689060 - 5689308 | 9394.26 |
| lysr family transcriptional regulator | APR48_26530 | Not Available | Positive | 5689395 - 5690303 | 33544.5 |
| ethanolamine utilization protein eutj | APR48_26535 | Not Available | Negative | 5690284 - 5691474 | 41971.4 |
| abc transporter atp-binding protein | APR48_26540 | Not Available | Negative | 5691528 - 5692235 | 25141.7 |
| abc transporter atp-binding protein | APR48_26545 | Not Available | Negative | 5692222 - 5692986 | 27709.6 |
| abc transporter permease | APR48_26550 | Not Available | Negative | 5692979 - 5693980 | 35715.7 |
| abc transporter permease | APR48_26555 | Not Available | Negative | 5693980 - 5694846 | 30490.5 |
| 2-hydroxy-3-oxopropionate reductase | APR48_26560 | Not Available | Negative | 5695095 - 5696000 | 30839.4 |
| aldehyde dehydrogenase | APR48_26565 | Not Available | Negative | 5696019 - 5697467 | 50679.4 |
| 3-oxoadipate coa-transferase | APR48_26575 | Not Available | Positive | 5697871 - 5698668 | 29179.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
