Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase family 39 | APR48_01840 | Not Available | Positive | 393928 - 395493 | 57159.3 |
| hypothetical protein | APR48_01845 | Not Available | Positive | 395490 - 396341 | 30197.8 |
| rna polymerase subunit sigma | APR48_01850 | Not Available | Positive | 396445 - 396954 | 18748.6 |
| hypothetical protein | APR48_01855 | Not Available | Positive | 396944 - 397954 | 35712.7 |
| hypothetical protein | APR48_01860 | Not Available | Positive | 398090 - 400531 | 87266.7 |
| hypothetical protein | APR48_01865 | Not Available | Positive | 400531 - 401280 | 26533.9 |
| rna polymerase subunit sigma | APR48_01870 | Not Available | Positive | 401369 - 401896 | 19773.0 |
| hypothetical protein | APR48_01875 | Not Available | Positive | 401863 - 402849 | 35391.2 |
| hypothetical protein | APR48_01880 | Not Available | Positive | 402979 - 405531 | 91998.3 |
| hypothetical protein | APR48_01885 | Not Available | Negative | 405557 - 406048 | 17714.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
