Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylcobinamide-phosphate guanylyltransferase | APR48_26370 | Not Available | Positive | 5652760 - 5653344 | 21191.9 |
| abc transporter substrate-binding protein | APR48_26375 | Not Available | Positive | 5653341 - 5654228 | 31271.1 |
| abc transporter permease | APR48_26380 | Not Available | Positive | 5654228 - 5655238 | 34070.2 |
| asnc family transcriptional regulator | APR48_26390 | Not Available | Negative | 5655683 - 5656183 | 18128.0 |
| glucosamine--fructose-6-phosphate aminotransferase | APR48_26395 | Not Available | Positive | 5656342 - 5658225 | 67527.0 |
| dna glycosylase | APR48_26400 | Not Available | Positive | 5658245 - 5658760 | 18194.0 |
| dna-binding protein | APR48_26405 | Not Available | Positive | 5658774 - 5659388 | 22607.1 |
| acetyltransferase | APR48_26410 | Not Available | Positive | 5659396 - 5659926 | 19310.2 |
| hypothetical protein | APR48_26415 | Not Available | Positive | 5659934 - 5660743 | 29664.1 |
| oxidoreductase | APR48_26420 | Not Available | Negative | 5660750 - 5661844 | 38884.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
