Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | APR48_26220 | Not Available | Positive | 5621195 - 5621698 | 18682.8 |
| cytochrome c' | APR48_26225 | Not Available | Negative | 5621708 - 5622013 | 10443.9 |
| hypothetical protein | APR48_26230 | Not Available | Positive | 5622140 - 5622394 | 9663.83 |
| hypothetical protein | APR48_26235 | Not Available | Positive | 5622498 - 5624177 | 61061.4 |
| dihydroxy-acid dehydratase | APR48_26240 | Not Available | Negative | 5624188 - 5625882 | 59133.5 |
| lysr family transcriptional regulator | APR48_26245 | Not Available | Positive | 5625993 - 5626949 | 34362.9 |
| lysr family transcriptional regulator | APR48_26250 | Not Available | Negative | 5626897 - 5627868 | 34941.1 |
| short-chain dehydrogenase | APR48_26255 | Not Available | Positive | 5628009 - 5628782 | 27163.2 |
| hypothetical protein | APR48_26260 | Not Available | Positive | 5628802 - 5629071 | 9224.57 |
| prolipoprotein diacylglyceryl transferase | APR48_26265 | Not Available | Positive | 5629136 - 5629990 | 32146.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
