Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxalase | APR48_26165 | Not Available | Positive | 5610800 - 5611189 | 13918.4 |
| transcriptional regulator | APR48_26170 | Not Available | Positive | 5611195 - 5611659 | 17315.0 |
| 3'-5' exonuclease | APR48_26175 | Not Available | Positive | 5611656 - 5612267 | 22488.8 |
| salicylate esterase | APR48_26180 | Not Available | Negative | 5612268 - 5613005 | 26938.1 |
| glycine/betaine abc transporter atp-binding protein | APR48_26190 | Not Available | Negative | 5613396 - 5614616 | 43857.1 |
| fumarate hydratase | APR48_26195 | Not Available | Positive | 5615134 - 5616531 | 49622.1 |
| 3-beta hydroxysteroid dehydrogenase | APR48_26200 | Not Available | Negative | 5616595 - 5617212 | 21881.1 |
| lysr family transcriptional regulator | APR48_26205 | Not Available | Positive | 5617326 - 5618243 | 33326.3 |
| hypothetical protein | APR48_26210 | Not Available | Negative | 5618247 - 5618873 | 22930.5 |
| amp-dependent synthetase | APR48_26215 | Not Available | Positive | 5619047 - 5621044 | 72605.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
