Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spovr family protein | APR48_26115 | Not Available | Positive | 5601915 - 5603489 | 61116.2 |
| 3-dehydroquinate dehydratase | APR48_26120 | Not Available | Negative | 5603497 - 5603937 | 15725.1 |
| lysr family transcriptional regulator | APR48_26125 | Not Available | Negative | 5603977 - 5604948 | 35349.6 |
| (2fe-2s)-binding protein | APR48_26130 | Not Available | Positive | 5605088 - 5605771 | 23743.3 |
| (2fe-2s)-binding protein | APR48_26135 | Not Available | Positive | 5605782 - 5606645 | 31989.0 |
| glutathione s-transferase | APR48_26140 | Not Available | Positive | 5606642 - 5607292 | 23885.7 |
| alcohol dehydrogenase | APR48_26145 | Not Available | Positive | 5607367 - 5608473 | 39494.9 |
| alpha/beta hydrolase | APR48_26150 | Not Available | Positive | 5608491 - 5609399 | 33254.4 |
| s-formylglutathione hydrolase | APR48_26155 | Not Available | Positive | 5609396 - 5610271 | 31358.4 |
| gcn5 family acetyltransferase | APR48_26160 | Not Available | Positive | 5610282 - 5610776 | 18787.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
