Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | APR48_26065 | Not Available | Positive | 5589742 - 5590722 | 34541.6 |
| mfs transporter | APR48_26070 | Not Available | Positive | 5590731 - 5591720 | 34107.4 |
| phosphatidylserine decarboxylase | APR48_26075 | Not Available | Positive | 5591859 - 5592710 | 31299.7 |
| transcriptional regulator | APR48_26080 | Not Available | Positive | 5592906 - 5593358 | 15543.5 |
| peptidylprolyl isomerase | APR48_26085 | Not Available | Positive | 5593483 - 5593833 | 12234.3 |
| molecular chaperone grpe | APR48_26090 | Not Available | Positive | 5594074 - 5594637 | 19904.2 |
| molecular chaperone dnak | APR48_26095 | Not Available | Positive | 5594761 - 5596704 | 69346.5 |
| molecular chaperone dnaj | APR48_26100 | Not Available | Positive | 5596827 - 5597966 | 40865.3 |
| serine/threonine protein kinase | APR48_26105 | Not Available | Positive | 5598643 - 5600565 | 73385.2 |
| hypothetical protein | APR48_26110 | Not Available | Positive | 5600626 - 5601918 | 49296.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
