Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate abc transporter atp-binding protein | APR48_26015 | Not Available | Positive | 5578889 - 5579668 | 27895.1 |
| amino acid abc transporter | APR48_26020 | Not Available | Positive | 5579726 - 5580520 | 28659.7 |
| nad-dependent dehydratase | APR48_26025 | Not Available | Positive | 5580534 - 5581346 | 29646.1 |
| gluconolactonase | APR48_26030 | Not Available | Positive | 5581361 - 5582251 | 31624.4 |
| c4-dicarboxylate abc transporter | APR48_26035 | Not Available | Positive | 5582316 - 5583293 | 36018.6 |
| c4-dicarboxylate abc transporter permease | APR48_26040 | Not Available | Positive | 5583431 - 5583919 | 18006.5 |
| hypothetical protein | APR48_26045 | Not Available | Positive | 5583929 - 5585224 | 45448.5 |
| galactarate dehydratase | APR48_26050 | Not Available | Positive | 5585224 - 5586783 | 55598.9 |
| hypothetical protein | APR48_26055 | Not Available | Positive | 5586869 - 5588890 | 73386.1 |
| oxidoreductase | APR48_26060 | Not Available | Positive | 5588950 - 5589711 | 26547.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
