Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein tolq | APR48_25955 | Not Available | Positive | 5569692 - 5570411 | 25943.4 |
| protein tolr | APR48_25960 | Not Available | Positive | 5570428 - 5570865 | 15636.2 |
| glucarate dehydratase | APR48_25975 | Not Available | Negative | 5571540 - 5572886 | 49239.9 |
| laci family transcriptional regulator | APR48_25980 | Not Available | Negative | 5572945 - 5573922 | 34667.7 |
| hypothetical protein | APR48_25985 | Not Available | Negative | 5573939 - 5574394 | 15648.9 |
| 5-dehydro-4-deoxyglucarate dehydratase | APR48_25990 | Not Available | Negative | 5574446 - 5575357 | 32505.1 |
| abc transporter substrate-binding protein | APR48_25995 | Not Available | Negative | 5575413 - 5576402 | 34538.9 |
| gntr family transcriptional regulator | APR48_26000 | Not Available | Negative | 5576525 - 5577355 | 29881.5 |
| abc transporter permease | APR48_26005 | Not Available | Positive | 5577470 - 5578216 | 27022.7 |
| amino acid abc transporter permease | APR48_26010 | Not Available | Positive | 5578246 - 5578869 | 23053.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
