Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_25855 | Not Available | Positive | 5543671 - 5544477 | 29546.1 |
| hypothetical protein | APR48_25860 | Not Available | Negative | 5544474 - 5545769 | 46216.4 |
| hypothetical protein | APR48_25865 | Not Available | Negative | 5545873 - 5548740 | 101005.0 |
| hypothetical protein | APR48_25870 | Not Available | Negative | 5548973 - 5552845 | 136118.0 |
| lytic transglycosylase | APR48_25875 | Not Available | Positive | 5553443 - 5554309 | 30608.8 |
| serine hydroxymethyltransferase | APR48_25880 | Not Available | Positive | 5554530 - 5555774 | 44834.9 |
| nrdr family transcriptional regulator | APR48_25885 | Not Available | Positive | 5555799 - 5556242 | 17107.7 |
| hypothetical protein | APR48_25890 | Not Available | Negative | 5556261 - 5556809 | 18664.7 |
| hypothetical protein | APR48_25895 | Not Available | Negative | 5556806 - 5557234 | 15774.7 |
| hypothetical protein | APR48_25900 | Not Available | Negative | 5557231 - 5560803 | 126320.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
