Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 5535268 - 5535360 | Not Available |
| aspartate kinase | APR48_25810 | Not Available | Negative | 5535388 - 5536656 | 45425.4 |
| trna(ile)-lysidine synthetase | APR48_25815 | Not Available | Negative | 5536736 - 5537701 | 34542.1 |
| acetyl-coa carboxylase carboxyl transferase subunit alpha | APR48_25820 | Not Available | Negative | 5537721 - 5538701 | 36568.6 |
| dna-3-methyladenine glycosylase | APR48_25825 | Not Available | Negative | 5538718 - 5539371 | 24423.6 |
| cysteine--trna ligase | APR48_25830 | Not Available | Negative | 5539389 - 5540768 | 50714.2 |
| hypothetical protein | APR48_25835 | Not Available | Positive | 5541020 - 5541610 | 21446.5 |
| peptidylprolyl isomerase | APR48_25840 | Not Available | Positive | 5541767 - 5542309 | 19099.7 |
| cyclophilin | APR48_25845 | Not Available | Positive | 5542342 - 5542854 | 18338.8 |
| udp-2,3-diacylglucosamine hydrolase | APR48_25850 | Not Available | Positive | 5542880 - 5543656 | 28390.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
