Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gdsl family lipase | APR48_25705 | Not Available | Negative | 5512547 - 5513890 | 46065.6 |
| carbamoyl-phosphate synthase large subunit | APR48_25710 | Not Available | Negative | 5513962 - 5517261 | 116002.0 |
| amp-dependent synthetase | APR48_25715 | Not Available | Negative | 5517272 - 5518918 | 59351.5 |
| tetr family transcriptional regulator | APR48_25720 | Not Available | Positive | 5519097 - 5519768 | 25094.8 |
| amino acid abc transporter substrate-binding protein | APR48_25725 | Not Available | Positive | 5519792 - 5521051 | 44956.0 |
| acetyl/propionyl-coa carboxylase subuit alpha | APR48_25730 | Not Available | Negative | 5521056 - 5522783 | 60540.5 |
| allophanate hydrolase | APR48_25735 | Not Available | Negative | 5522780 - 5524384 | 55548.6 |
| hypothetical protein | APR48_25740 | Not Available | Negative | 5524384 - 5525121 | 25596.4 |
| gntr family transcriptional regulator | APR48_25745 | Not Available | Positive | 5525435 - 5526127 | 25384.7 |
| hypothetical protein | APR48_25750 | Not Available | Negative | 5526174 - 5526371 | 7156.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
