Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbamoyl-phosphate synthase large subunit | APR48_25650 | Not Available | Positive | 5497496 - 5500795 | 116002.0 |
| gdsl family lipase | APR48_25655 | Not Available | Positive | 5500867 - 5502210 | 46065.6 |
| hypothetical protein | APR48_25660 | Not Available | Positive | 5502354 - 5502731 | 14162.7 |
| formyltetrahydrofolate deformylase | APR48_25665 | Not Available | Negative | 5502809 - 5503663 | 31354.5 |
| omega amino acid--pyruvate aminotransferase | APR48_25670 | Not Available | Positive | 5503796 - 5505130 | 48479.3 |
| hypothetical protein | APR48_25675 | Not Available | Positive | 5505479 - 5505979 | 16301.6 |
| hypothetical protein | APR48_25685 | Not Available | Negative | 5508778 - 5509278 | 16301.6 |
| omega amino acid--pyruvate aminotransferase | APR48_25690 | Not Available | Negative | 5509627 - 5510961 | 48479.3 |
| formyltetrahydrofolate deformylase | APR48_25695 | Not Available | Positive | 5511094 - 5511948 | 31354.5 |
| hypothetical protein | APR48_25700 | Not Available | Negative | 5512026 - 5512403 | 14162.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
