Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_25600 | Not Available | Positive | 5486115 - 5486322 | 7684.97 |
| hypothetical protein | APR48_25605 | Not Available | Positive | 5486854 - 5488338 | 52953.2 |
| hypothetical protein | APR48_25610 | Not Available | Positive | 5488386 - 5488583 | 7156.7 |
| gntr family transcriptional regulator | APR48_25615 | Not Available | Negative | 5488630 - 5489322 | 25384.7 |
| hypothetical protein | APR48_25620 | Not Available | Positive | 5489636 - 5490373 | 25596.4 |
| allophanate hydrolase | APR48_25625 | Not Available | Positive | 5490373 - 5491977 | 55548.6 |
| acetyl/propionyl-coa carboxylase subuit alpha | APR48_25630 | Not Available | Positive | 5491974 - 5493701 | 60540.5 |
| amino acid abc transporter substrate-binding protein | APR48_25635 | Not Available | Negative | 5493706 - 5494965 | 44956.0 |
| tetr family transcriptional regulator | APR48_25640 | Not Available | Negative | 5494989 - 5495660 | 25094.8 |
| amp-dependent synthetase | APR48_25645 | Not Available | Positive | 5495839 - 5497485 | 59351.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
