Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_25550 | Not Available | Negative | 5475690 - 5476901 | 41995.9 |
| histidine kinase | APR48_25555 | Not Available | Negative | 5477057 - 5478475 | 52178.6 |
| gntr family transcriptional regulator | APR48_25560 | Not Available | Negative | 5478640 - 5480043 | 50408.7 |
| hypothetical protein | APR48_25565 | Not Available | Positive | 5480425 - 5480907 | 17749.5 |
| aliphatic nitrilase | APR48_25570 | Not Available | Positive | 5480911 - 5481984 | 38655.3 |
| radical sam protein | APR48_25575 | Not Available | Positive | 5481947 - 5483017 | 37713.6 |
| histone acetyltransferase | APR48_25580 | Not Available | Positive | 5483019 - 5483579 | 20733.0 |
| hypothetical protein | APR48_25585 | Not Available | Positive | 5483576 - 5484589 | 35520.8 |
| glycosyl transferase family 1 | APR48_25590 | Not Available | Positive | 5484582 - 5485802 | 43846.6 |
| hypothetical protein | APR48_25595 | Not Available | Positive | 5485793 - 5486071 | 10470.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
