Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_01740 | Not Available | Negative | 374910 - 376679 | 65217.1 |
| cytosine deaminase | APR48_01745 | Not Available | Negative | 376855 - 378195 | 49118.1 |
| alpha/beta hydrolase | APR48_01750 | Not Available | Negative | 378257 - 379045 | 27715.5 |
| hydrolase | APR48_01755 | Not Available | Negative | 379056 - 379925 | 31293.5 |
| arac family transcriptional regulator | APR48_01760 | Not Available | Positive | 380111 - 381037 | 33335.5 |
| hypothetical protein | APR48_01765 | Not Available | Positive | 381060 - 381296 | 8369.2 |
| tetr family transcriptional regulator | APR48_01770 | Not Available | Negative | 381329 - 381964 | 23629.6 |
| hypothetical protein | APR48_01775 | Not Available | Positive | 382164 - 383783 | 54367.7 |
| hypothetical protein | APR48_01780 | Not Available | Positive | 383823 - 384650 | 29054.8 |
| alpha/beta hydrolase | APR48_01785 | Not Available | Positive | 384647 - 385327 | 24024.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
