Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_25445 | Not Available | Negative | 5455202 - 5456242 | 37325.9 |
| enoyl-coa hydratase | APR48_25450 | Not Available | Negative | 5456366 - 5457151 | 28038.8 |
| hypothetical protein | APR48_25455 | Not Available | Positive | 5457249 - 5458070 | 29596.9 |
| abc transporter atp-binding protein | APR48_25460 | Not Available | Negative | 5458075 - 5458767 | 25254.2 |
| abc transporter atp-binding protein | APR48_25465 | Not Available | Negative | 5458780 - 5459658 | 31793.4 |
| urea abc transporter permease subunit urtc | APR48_25470 | Not Available | Negative | 5459655 - 5460881 | 44513.3 |
| urea abc transporter permease | APR48_25475 | Not Available | Negative | 5460878 - 5462425 | 54331.7 |
| branched-chain amino acid abc transporter substrate-binding protein | APR48_25480 | Not Available | Negative | 5462516 - 5463784 | 46006.3 |
| nucleotide pyrophosphohydrolase | APR48_25485 | Not Available | Negative | 5463921 - 5464235 | 11703.9 |
| transcriptional regulator | APR48_25490 | Not Available | Positive | 5464308 - 5464916 | 22016.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
