Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_25395 | Not Available | Positive | 5445027 - 5445272 | 8452.13 |
| alcohol dehydrogenase | APR48_25400 | Not Available | Negative | 5445297 - 5446307 | 36869.2 |
| hypothetical protein | APR48_25405 | Not Available | Negative | 5446394 - 5447635 | 42431.6 |
| rna polymerase subunit sigma-24 | APR48_25410 | Not Available | Positive | 5447779 - 5448342 | 21599.4 |
| anti-sigma factor | APR48_25415 | Not Available | Positive | 5448329 - 5448988 | 23200.8 |
| hypothetical protein | APR48_25420 | Not Available | Positive | 5449158 - 5450162 | 37495.2 |
| hypothetical protein | APR48_25425 | Not Available | Positive | 5450213 - 5452087 | 68319.3 |
| mfs transporter | APR48_25430 | Not Available | Negative | 5452092 - 5453291 | 40734.0 |
| enoyl-coa hydratase | APR48_25435 | Not Available | Negative | 5453456 - 5454214 | 26882.3 |
| hypothetical protein | APR48_25440 | Not Available | Negative | 5454211 - 5455164 | 33841.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
