Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | APR48_25345 | Not Available | Negative | 5434625 - 5434924 | 10449.0 |
| thioredoxin | APR48_25350 | Not Available | Negative | 5435056 - 5435976 | 33841.4 |
| n5-carboxyaminoimidazole ribonucleotide mutase | APR48_25355 | Not Available | Positive | 5436013 - 5436555 | 18254.1 |
| phosphoribosylaminoimidazole carboxylase | APR48_25360 | Not Available | Positive | 5436552 - 5437733 | 41739.5 |
| translation factor sua5 | APR48_25365 | Not Available | Positive | 5437741 - 5438742 | 34827.7 |
| hypothetical protein | APR48_25370 | Not Available | Negative | 5438769 - 5440328 | 53348.1 |
| peptidase m15 | APR48_25375 | Not Available | Negative | 5440487 - 5441944 | 51849.3 |
| gdp-mannose pyrophosphatase | APR48_25380 | Not Available | Negative | 5441953 - 5442540 | 22093.2 |
| deor family transcriptional regulator | APR48_25385 | Not Available | Positive | 5442620 - 5443390 | 26674.5 |
| rnd transporter | APR48_25390 | Not Available | Negative | 5443394 - 5444810 | 49430.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
