Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | APR48_25295 | Not Available | Positive | 5424068 - 5424976 | 33476.8 |
| phosphoglycerate kinase | APR48_25300 | Not Available | Positive | 5425066 - 5426259 | 41030.4 |
| pyruvate kinase | APR48_25305 | Not Available | Positive | 5426360 - 5427808 | 51936.8 |
| 1-aminocyclopropane-1-carboxylate deaminase | APR48_25310 | Not Available | Negative | 5427809 - 5428825 | 36788.1 |
| asnc family transcriptional regulator | APR48_25315 | Not Available | Positive | 5428978 - 5429517 | 19455.8 |
| esterase | APR48_25320 | Not Available | Positive | 5429645 - 5430529 | 31242.7 |
| fructose-1,6-bisphosphate aldolase | APR48_25325 | Not Available | Positive | 5430596 - 5431660 | 38197.0 |
| phosphoribosylaminoimidazole-succinocarboxamide synthase | APR48_25330 | Not Available | Positive | 5431763 - 5432668 | 32983.7 |
| heat-shock protein | APR48_25335 | Not Available | Negative | 5432723 - 5433169 | 15229.3 |
| regulator | APR48_25340 | Not Available | Negative | 5433282 - 5434583 | 47316.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
