Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionyl-trna formyltransferase | APR48_25245 | Not Available | Positive | 5415424 - 5416374 | 33413.5 |
| branched-chain amino acid abc transporter permease | APR48_25250 | Not Available | Positive | 5416382 - 5417122 | 26641.4 |
| branched-chain amino acid transporter | APR48_25255 | Not Available | Positive | 5417119 - 5417457 | 12423.4 |
| 6-phosphogluconate dehydrogenase | APR48_25260 | Not Available | Negative | 5417441 - 5418385 | 32889.6 |
| abc transporter substrate-binding protein | APR48_25265 | Not Available | Negative | 5418422 - 5419405 | 35055.8 |
| mbl fold metallo-hydrolase | APR48_25270 | Not Available | Negative | 5419453 - 5420427 | 35485.3 |
| hypothetical protein | APR48_25275 | Not Available | Negative | 5420424 - 5420633 | 7266.55 |
| fad-binding monooxygenase | APR48_25280 | Not Available | Negative | 5420630 - 5422285 | 60287.7 |
| hypothetical protein | APR48_25285 | Not Available | Negative | 5422301 - 5423422 | 40557.3 |
| glyoxalase | APR48_25290 | Not Available | Negative | 5423415 - 5423960 | 20002.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
