Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| indolepyruvate ferredoxin oxidoreductase | APR48_25195 | Not Available | Positive | 5401434 - 5405036 | 131340.0 |
| preprotein translocase subunit yajc | APR48_25200 | Not Available | Positive | 5405368 - 5405700 | 11588.6 |
| preprotein translocase subunit secd | APR48_25205 | Not Available | Positive | 5405794 - 5407686 | 67961.5 |
| preprotein translocase subunit secf | APR48_25210 | Not Available | Positive | 5407699 - 5408652 | 35075.1 |
| hypothetical protein | APR48_25215 | Not Available | Positive | 5408818 - 5411184 | 85586.2 |
| protein smg | APR48_25220 | Not Available | Negative | 5411198 - 5411716 | 19182.7 |
| dna processing protein dpra | APR48_25225 | Not Available | Negative | 5411844 - 5412998 | 40280.4 |
| peptidoglycan-binding protein | APR48_25230 | Not Available | Negative | 5413015 - 5414229 | 44060.9 |
| peptide deformylase | APR48_25235 | Not Available | Positive | 5414390 - 5414911 | 19322.4 |
| hypothetical protein | APR48_25240 | Not Available | Positive | 5414915 - 5415418 | 18989.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
