Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein | APR48_25090 | Not Available | Negative | 5379941 - 5380138 | 6797.37 |
| hypothetical protein | APR48_25095 | Not Available | Negative | 5380551 - 5382122 | 56614.2 |
| hypothetical protein | APR48_25100 | Not Available | Negative | 5382089 - 5383240 | 39868.4 |
| hypothetical protein | APR48_25105 | Not Available | Negative | 5383401 - 5384948 | 54701.4 |
| lysr family transcriptional regulator | APR48_25110 | Not Available | Positive | 5385044 - 5385988 | 35033.4 |
| hydroxyquinol 1,2-dioxygenase | APR48_25115 | Not Available | Positive | 5386119 - 5386649 | 19788.4 |
| hydroxyquinol 1,2-dioxygenase | APR48_25120 | Not Available | Positive | 5386676 - 5387683 | 37934.6 |
| betaine-aldehyde dehydrogenase | APR48_25125 | Not Available | Positive | 5387818 - 5389281 | 52826.4 |
| abc transporter substrate-binding protein | APR48_25130 | Not Available | Positive | 5389327 - 5390580 | 44328.9 |
| abc transporter atp-binding protein | APR48_25135 | Not Available | Positive | 5390586 - 5391305 | 25843.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
