Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron dicitrate transport regulator fecr | APR48_24985 | Not Available | Negative | 5356124 - 5356901 | 28079.6 |
| hypothetical protein | APR48_24995 | Not Available | Positive | 5357609 - 5358115 | 18400.8 |
| mur ligase | APR48_25000 | Not Available | Positive | 5358218 - 5361331 | 114031.0 |
| hypothetical protein | APR48_25005 | Not Available | Positive | 5361328 - 5361621 | 10608.9 |
| abc transporter | APR48_25010 | Not Available | Positive | 5361705 - 5363519 | 65223.6 |
| secretion protein hyld | APR48_25015 | Not Available | Positive | 5363600 - 5364916 | 47960.5 |
| transporter | APR48_25020 | Not Available | Positive | 5364913 - 5366472 | 56751.9 |
| fis family transcriptional regulator | APR48_25025 | Not Available | Negative | 5366518 - 5367954 | 52311.5 |
| hypothetical protein | APR48_25030 | Not Available | Negative | 5367971 - 5369917 | 66652.1 |
| hypothetical protein | APR48_25035 | Not Available | Negative | 5370006 - 5370503 | 17715.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
