Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| twitching motility protein pilt | APR48_01690 | Not Available | Positive | 362994 - 363428 | 15576.8 |
| gntr family transcriptional regulator | APR48_01695 | Not Available | Negative | 363610 - 365082 | 53032.6 |
| aminotransferase | APR48_01700 | Not Available | Positive | 365276 - 366451 | 42271.9 |
| phenazine biosynthesis protein phzf | APR48_01705 | Not Available | Positive | 366496 - 367377 | 31156.2 |
| glutathione s-transferase | APR48_01710 | Not Available | Negative | 367389 - 368081 | 25798.3 |
| short-chain dehydrogenase | APR48_01715 | Not Available | Positive | 368267 - 369088 | 29234.4 |
| amp-dependent synthetase | APR48_01720 | Not Available | Positive | 369125 - 370708 | 56469.4 |
| carboxyvinyl-carboxyphosphonate phosphorylmutase | APR48_01725 | Not Available | Negative | 370743 - 371603 | 30879.3 |
| twin-arginine translocation pathway signal | APR48_01730 | Not Available | Negative | 371645 - 372598 | 33069.9 |
| propionate catabolism operon regulatory protein prpr | APR48_01735 | Not Available | Positive | 372807 - 374774 | 70125.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
