Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferrochelatase | APR48_24880 | Not Available | Positive | 5331347 - 5332369 | 37735.0 |
| methyltransferase type 12 | APR48_24885 | Not Available | Positive | 5332366 - 5333214 | 31183.6 |
| hypothetical protein | APR48_24890 | Not Available | Positive | 5333535 - 5334323 | 29322.5 |
| thioredoxin | APR48_24895 | Not Available | Negative | 5334334 - 5334837 | 19040.7 |
| hypothetical protein | APR48_24900 | Not Available | Negative | 5335051 - 5335557 | 18347.0 |
| hydrolase | APR48_24905 | Not Available | Negative | 5335625 - 5336515 | 32826.2 |
| abc transporter permease | APR48_24910 | Not Available | Negative | 5336537 - 5337607 | 38214.8 |
| abc transporter permease | APR48_24915 | Not Available | Negative | 5337765 - 5338745 | 34645.2 |
| abc transporter atp-binding protein | APR48_24920 | Not Available | Negative | 5338742 - 5339467 | 26158.0 |
| abc transporter atp-binding protein | APR48_24925 | Not Available | Negative | 5339464 - 5340231 | 27226.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
